Anke van den Berg
prof. dr.
I work as a clinical molecular biologist in the department of Pathology. In this function I supervise and implement advanced molecular diagnostic techniques. Within my research line, I focus on the molecular pathogenesis of B-cell Hodgkin and non-Hodgkin lymphoma. The specific fields of interest are genomic aberrations, genetic susceptibility, and the role of small and long noncoding RNAs. I have several international collaborations and am PI and co-PI in various projects.
Additional file 4: Table S1. of Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies
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10.6084/m9.figshare.c.3601100_d7
Overview of single-cell sequencing samples and sequencing statistics. An overview of general sequencing and analysis statistics of the single-cell sequencing data. The number of analysed reads corresponds to the number of uniquely mappable reads used in the copy number annotation pipeline. (XLSX 38 kb)
Bjorn Bakker (Creator)Aaron Taudt (Creator)Mirjam E. Belderbos (Creator)David Porubský (Creator)Diana Spierings (Creator)Tristan de Jong (Contributor)Nancy Halsema (Creator)Inge de Groote-Kazemier (Creator)Karina Hoekstra-Wakker (Creator)Allan Bradley (Creator)Eveline de Bont (Contributor)Anke van den Berg (Contributor)Victor Guryev (Creator)Peter M. Lansdorp (Terry Fox Laboratory, BC Cancer Agency, University of British Columbia) (Creator)Maria Colomé-Tatché (Institute of Epidemiology 2) (Contributor)Floris Foijer (Creator)
Inhibition of the miR-155 target NIAM phenocopies the growth promoting effect of miR-155 in B-cell lymphoma [L1236]
Several studies have indicated an important role for miR-155 in the pathogenesis of B-cell lymphoma. Highly elevated levels of miR-155 were indeed observed in most B-cell lymphomas with the exception of Burkitt lymphoma (BL). However, the molecular mechanisms that underlie the oncogenic role of miR-155 in B-cell lymphoma are not well understood. To identify the miR-155 targets relevant for B-cell lymphoma, we performed RNA immunoprecipitation of Argonaute 2 in Hodgkin lymphoma (HL) cells upon miR-155 inhibition and in BL cells upon ectopic expression of miR-155. We identified 54...
Joost Kluiver (Creator)Izabella Slezak (Creator)Anke van den Berg (Creator)